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Bump bio from 2.3.0 to 3.0.0#56

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wdecoster merged 1 commit intomasterfrom
dependabot/cargo/bio-3.0.0
Feb 3, 2026
Merged

Bump bio from 2.3.0 to 3.0.0#56
wdecoster merged 1 commit intomasterfrom
dependabot/cargo/bio-3.0.0

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@dependabot dependabot bot commented on behalf of github Feb 2, 2026

Bumps bio from 2.3.0 to 3.0.0.

Changelog

Sourced from bio's changelog.

3.0.0 (2025-09-19)

⚠ BREAKING CHANGES

  • improved API and internals for pattern_matching::myers and add LazyMatches::dist_at() (#640)

Features

  • Added BEDPE file support (#631) (61adf2a)
  • improved API and internals for pattern_matching::myers and add LazyMatches::dist_at() (#640) (122a44d)
Commits
  • 14c0425 chore(master): release 3.0.0 (#646)
  • 61adf2a feat: Added BEDPE file support (#631)
  • 122a44d feat!: improved API and internals for pattern_matching::myers and add LazyMat...
  • 0a36bcf refactor: Clippy warnings caused by legacy numeric constants (#644)
  • a56a02a refactor: removed lazy_static! dependency and cleaned up scores (#639)
  • See full diff in compare view

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Bumps [bio](https://github.com/rust-bio/rust-bio) from 2.3.0 to 3.0.0.
- [Release notes](https://github.com/rust-bio/rust-bio/releases)
- [Changelog](https://github.com/rust-bio/rust-bio/blob/master/CHANGELOG.md)
- [Commits](rust-bio/rust-bio@v2.3.0...v3.0.0)

---
updated-dependencies:
- dependency-name: bio
  dependency-version: 3.0.0
  dependency-type: direct:production
  update-type: version-update:semver-major
...

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dependabot bot commented on behalf of github Feb 2, 2026

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The following labels could not be found: dependencies, rust. Please create them before Dependabot can add them to a pull request.

Please fix the above issues or remove invalid values from dependabot.yml.

@wdecoster wdecoster merged commit 33022b4 into master Feb 3, 2026
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@dependabot dependabot bot deleted the dependabot/cargo/bio-3.0.0 branch February 3, 2026 09:10
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