Search results

Enforce hierarchy in clade assignments

Status: Open.

#34 In nextstrain/public;

· joverlee521 opened on Dec 24, 2025

Output filter/subsample log

Status: Open.

#33 In nextstrain/public;

· joverlee521 opened on Dec 4, 2025

Add geographic streamtrees support to relevant pathogens

Status: Open.

#32 In nextstrain/public;

· joverlee521 opened on Dec 1, 2025

Improve input block when using augur subsample

Status: Open.

#31 In nextstrain/public;

· victorlin opened on Oct 28, 2025

Replace assign-colors.py

Status: Open.

#30 In nextstrain/public;

· joverlee521 opened on Oct 21, 2025

Use Pathoplexus

Status: Open.

#29 In nextstrain/public;

· victorlin opened on Oct 17, 2025

Custom workflow config merging

Status: Open.

#28 In nextstrain/public;

· victorlin opened on Oct 6, 2025

Configuring augur subsample in Snakemake workflows

Status: Open.

#27 In nextstrain/public;

· victorlin opened on Oct 4, 2025

Use augur subsample

Status: Open.

#26 In nextstrain/public;

· victorlin opened on Sep 25, 2025

Add/update multiple input support for existing pathogens

Status: Open.

#25 In nextstrain/public;

· joverlee521 opened on Sep 23, 2025

Output filtered metadata

Status: Open.

#24 In nextstrain/public;

· victorlin opened on Sep 15, 2025

Add/update CHANGELOG for existing pathogens

Status: Open.

#22 In nextstrain/public;

· joverlee521 opened on Jun 16, 2025