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  1. Mugration-Analysis Mugration-Analysis Public

    Mugration-Analysis is a migration analysis of viral sequences using Treetime Mugration. The workflow goes from a time-scaled phylogenetic tree and metadata to region-to-region migration matrices an…

    Python

  2. Origin-and-Dispersion-of-HIV-1-Subtype-F1 Origin-and-Dispersion-of-HIV-1-Subtype-F1 Public

    This repository contains all data and analyses from the study on the origin and spread of HIV-1 Subtype F1, including sequences, alignments, phylogenetic trees, and scripts for evolutionary and phy…