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LDSC Genetic Correlation Analysis Returns All NA Values - Seeking Help

Status: Open.

#496 In bulik/ldsc;

· NoahTsui1998 opened on Jan 19, 2026

Quality Control when converting 1000 Genome Project Phase 3 vcf data into plink file

Status: Open.

#495 In bulik/ldsc;

· wusiwei2022 opened on Dec 30, 2025

negative MAF/LD Score Correlation

Status: Open.

#494 In bulik/ldsc;

· KizBaolin opened on Dec 18, 2025

Segmentation fault

Status: Open.

#492 In bulik/ldsc;

· 123liumeng opened on Nov 4, 2025

Number of variants included for computing LD score at each SNP

Status: Open.

#491 In bulik/ldsc;

· gsgarlata opened on Jul 30, 2025

Error running munge_sumstats.py

Status: Open.

#490 In bulik/ldsc;

· mmaalvarez opened on Jul 29, 2025

Is it possible to run heritability and/or partitioned heritability with just p values and no signed-sumstats? And if yes - how?

Status: Open.

#489 In bulik/ldsc;

· Ayshan4444 opened on Jul 23, 2025

SNPs included in the pre-computed LD scores for European are much less than SNPs in 1000 genome phase 1 dataset

Status: Open.

#488 In bulik/ldsc;

· wusiwei2022 opened on Jul 1, 2025

Clarification on Baseline Model and Obtaining Enrichment Scores for Cell-Type-Specific Heritability (e.g., with scATAC-seq annotations)

Status: Open.

#484 In bulik/ldsc;

· ShanshanHe-44 opened on Jun 11, 2025

Error with calculating LD score using w_hm3.snplist: After merging with --print-snps, no SNPs remain.

Status: Open.

#483 In bulik/ldsc;

· ShanshanHe-44 opened on May 30, 2025

what is the value in parenthesis in Total Observed scale h2?

Status: Open.

#481 In bulik/ldsc;

· complexgenome opened on May 14, 2025

How to make customize <code>panel</code> ?

Status: Open.

#479 In bulik/ldsc;

· jiangpuxuan opened on May 12, 2025