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1. Danko-Lab/clipnet Danko-Lab/clipnet Public

   A deep learning approach to predicting transcription initiation from sequence at single nucleotide resolution

   Jupyter Notebook 14 3

2. PersonalBPNet PersonalBPNet Public

   A small modification to bpnetlite's BPNet to accomodate large validation datasets.

   Python 4 1

3. Danko-Lab/proseq2.0 Danko-Lab/proseq2.0 Public

   Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing

   Shell 30 14

4. Danko-Lab/clipnet_ablation Danko-Lab/clipnet_ablation Public

   Jupyter Notebook 1