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@TIO-IKIM

TIO-IKIM

Research Group of Translational Image-guided Oncology (TIO), Institute for Artificial Intelligence in Medicine (IKIM), Essen

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  1. CellViT CellViT Public

    CellViT: Vision Transformers for Precise Cell Segmentation and Classification

    Python 356 63

  2. CellViT-plus-plus CellViT-plus-plus Public

    Python 184 40

  3. CLUE CLUE Public

    CLUE: A Clinical Language Understanding Evaluation for LLMs

    Python 20 5

  4. medical_image_deidentification medical_image_deidentification Public

    De-Identification of Medical Imaging Data: A Comprehensive Tool for Ensuring Patient Privacy

    Python 19 3

  5. CellViT-Inference CellViT-Inference Public

    Python 13 1

  6. PhaseGen PhaseGen Public

    PhaseGen - Generate MRI raw data based on magnitudinal data

    Python 11 1

Repositories

Showing 10 of 24 repositories
  • Learning-to-Look-Closer Public Forked from MIC-DKFZ/nnUNet
    TIO-IKIM/Learning-to-Look-Closer’s past year of commit activity
    Python 1 Apache-2.0 2,304 0 0 Updated Feb 3, 2026
  • kViT Public

    Complex-valued Vision Transformer designed for efficient MRI classification directly from raw k-Space data using physics-informed radial patching

    TIO-IKIM/kViT’s past year of commit activity
    Python 2 0 0 0 Updated Jan 27, 2026
  • AMD_SemSeg Public
    TIO-IKIM/AMD_SemSeg’s past year of commit activity
    0 0 0 0 Updated Jan 15, 2026
  • medical_image_deidentification Public

    De-Identification of Medical Imaging Data: A Comprehensive Tool for Ensuring Patient Privacy

    TIO-IKIM/medical_image_deidentification’s past year of commit activity
    Python 19 3 0 0 Updated Jan 6, 2026
  • Spacewalker Public

    Traversing Representation Spaces for Fast Interactive Exploration and Annotation of Unstructured Data

    TIO-IKIM/Spacewalker’s past year of commit activity
    JavaScript 1 MIT 0 0 0 Updated Sep 3, 2025
  • CellViT-Inference Public
    TIO-IKIM/CellViT-Inference’s past year of commit activity
    Python 13 1 2 0 Updated Aug 13, 2025
  • CellViT-plus-plus Public
    TIO-IKIM/CellViT-plus-plus’s past year of commit activity
    Python 184 40 22 2 Updated Jul 23, 2025
  • CellViT Public

    CellViT: Vision Transformers for Precise Cell Segmentation and Classification

    TIO-IKIM/CellViT’s past year of commit activity
    Python 356 63 20 0 Updated Jul 23, 2025
  • controlled-clinical-generation Public

    This repository accompanies the paper Towards Conditioning Clinical Text Generation for User Control, which explores methods for enhancing controllability in clinical text generation through dataset augmentation and structured generation workflows.

    TIO-IKIM/controlled-clinical-generation’s past year of commit activity
    0 0 0 0 Updated May 28, 2025
  • PathoPatcher Public

    PathoPatcher is a Python project designed for accelerating Whole Slide Image Preprocessing, employing AI-based preprocessing techniques with features like annotation handling, color normalization, and configurable parameters

    TIO-IKIM/PathoPatcher’s past year of commit activity
    Python 10 7 3 0 Updated May 8, 2025
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