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Pull requests: NVIDIA/bionemo-framework

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Pull requests list

BIO-48: Support for packed bshd seq dataloader and more advanced fp8 integration for llama3
#1418 opened Jan 14, 2026 by savitha-eng Loading…
4 of 9 tasks
4
Implement predict and inference scripts, and update examples
#1417 opened Jan 14, 2026 by jstjohn • Draft
9 tasks
3
Add fp8 tests for llama3
#1416 opened Jan 13, 2026 by pstjohn Loading…
3
Add tensor parallelism to the cp-aware dataloader and collator
#1415 opened Jan 13, 2026 by pstjohn Loading…
Add CP tests for Llama3
#1414 opened Jan 13, 2026 by pstjohn Loading…
Adds fp8 stats logging to ESM2 FSDP2 training script [draft]
#1413 opened Jan 12, 2026 by jomitchellnv Loading…
1 of 9 tasks
5
NeMo2 to Megatron Bridge Checkpoint Conversion and Fine-tuning
#1411 opened Jan 9, 2026 by jstjohn Loading…
1 of 9 tasks
9
Jm/fp8 first last layer off
#1404 opened Jan 8, 2026 by jomitchellnv Loading…
9 tasks
1
Use shared storage dir ciflow:skip Skip all CI tests for this PR
#1395 opened Dec 23, 2025 by jwilber Loading…
@jwilber
3
Fixing argparse argument name error
#1393 opened Dec 22, 2025 by jstjohn • Draft
9 tasks
3
in sequence padding [DRAFT TEST]
#1392 opened Dec 19, 2025 by jomitchellnv Loading…
9 tasks
1
Doc edits to BioNeMo recipes ciflow:skip Skip all CI tests for this PR documentation Improvements or additions to documentation
#1389 opened Dec 19, 2025 by lvojtku Loading…
2 of 9 tasks
@jwilber
3
experiment with lepton dev pod container workflow on compute node
#1388 opened Dec 18, 2025 by jwilber Loading…
1
Jm/fp8 debug mxfp8
#1387 opened Dec 18, 2025 by jomitchellnv Loading…
9 tasks
1
adds fp8 debug [ do not merge]
#1385 opened Dec 17, 2025 by jomitchellnv Loading…
9 tasks
1
Bump filelock from 3.18.0 to 3.20.1 in /bionemo-recipes/recipes/codonfm_ptl_te dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1384 opened Dec 16, 2025 by dependabot bot Loading…
1
manual gc in llama3
#1381 opened Dec 15, 2025 by pstjohn • Draft
1
Bump urllib3 from 1.26.20 to 2.6.0 in /bionemo-recipes/recipes/codonfm_ptl_te dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1365 opened Dec 5, 2025 by dependabot bot Loading…
1
Bump werkzeug from 3.1.3 to 3.1.4 in /bionemo-recipes/recipes/codonfm_ptl_te dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1360 opened Dec 2, 2025 by dependabot bot Loading…
1
Bump fonttools from 4.59.0 to 4.61.0 in /bionemo-recipes/recipes/codonfm_ptl_te dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1359 opened Dec 1, 2025 by dependabot bot Loading…
1
Bump ray from 2.49.2 to 2.52.0 in /bionemo-recipes/recipes/codonfm_ptl_te dependencies Pull requests that update a dependency file python Pull requests that update Python code
#1352 opened Nov 26, 2025 by dependabot bot Loading…
1
Savitha/add phylo masking to llama3
#1351 opened Nov 26, 2025 by savitha-eng Loading…
5 tasks done
1
demo for bias initialization
#1350 opened Nov 26, 2025 by pstjohn • Draft
1
Pstjohn/te update
#1342 opened Nov 22, 2025 by pstjohn • Draft
1
Dev/ba/fix evo2 lora test
#1335 opened Nov 20, 2025 by balvisio Loading…
9 tasks
1
ProTip! Exclude everything labeled bug with -label:bug.