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MikolajKocikowski/README.md

Hi there!

I'm Mikołaj, I do computational biology and bioinformatics. Currently working on network biology approaches to cancer immunotherapy and building NGS analysis tools for pandemic preparedness. Always open to collaboration. Check out my personal website to find out more!

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  1. covid-scfv-publication covid-scfv-publication Public

    Instructions for reproducing the analysis from our manuscript in progress.

    JavaScript 1

  2. BarkingUpTree-ploscb BarkingUpTree-ploscb Public

    Barking Up the Right Tree: Immune Checkpoint Signatures of Human and Dog Cancers; doi.org/10.1101/2024.06.26.600825

  3. seq2scfv-unofficial-updated seq2scfv-unofficial-updated Public

    Forked from ngs-ai-org/seq2scfv

    The original Seq2scFv Dockerfile no longer builds on modern systems; this repository provides a fixed version to run and extend the pipeline reliably.

    Python 1

  4. SFGLab/Team1_Gene_Prioritization_GNN SFGLab/Team1_Gene_Prioritization_GNN Public

    Jupyter Notebook 2 2

  5. seq2scfv-fixes seq2scfv-fixes Public

    Workarounds and Docker build fixes for seq2scfv

    2

  6. Quarto Quarto Public

    Snippets for Quarto - especially image display tweaks

    1