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@IntegratedPathologyUnit-ICR

Integrated Pathology Unit

The Integrated Pathology Unit at The Royal Marsden and The Institute of Cancer Research, London is a pioneer in the burgeoning field of digital pathology.

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  1. c-pmat c-pmat Public

    High throughput quantitative preprocessing and quality control for extracellular matrix

    Python 3 1

  2. pyhscore pyhscore Public

    Package to compute H-scores in Python, including the canonical cell-based H-score and a pixel-wise implementation inspired by Ram et al. 2021

    Jupyter Notebook

  3. popidd-io popidd-io Public

    A simple napari plugin to read digital pathology images and annotations.

    Python

  4. bioml_datascience bioml_datascience Public

    Data Science Seminar Series (ICR Learning and development)

    Jupyter Notebook

  5. CD31_BVSegNet CD31_BVSegNet Public

    Python

  6. brightseg brightseg Public

    Jupyter Notebook

Repositories

Showing 6 of 6 repositories
  • brightseg Public
    IntegratedPathologyUnit-ICR/brightseg’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Dec 4, 2025
  • popidd-io Public

    A simple napari plugin to read digital pathology images and annotations.

    IntegratedPathologyUnit-ICR/popidd-io’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Dec 2, 2025
  • CD31_BVSegNet Public
    IntegratedPathologyUnit-ICR/CD31_BVSegNet’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 28, 2025
  • bioml_datascience Public

    Data Science Seminar Series (ICR Learning and development)

    IntegratedPathologyUnit-ICR/bioml_datascience’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 6, 2025
  • c-pmat Public

    High throughput quantitative preprocessing and quality control for extracellular matrix

    IntegratedPathologyUnit-ICR/c-pmat’s past year of commit activity
    Python 3 MIT 1 0 0 Updated Nov 3, 2025
  • pyhscore Public

    Package to compute H-scores in Python, including the canonical cell-based H-score and a pixel-wise implementation inspired by Ram et al. 2021

    IntegratedPathologyUnit-ICR/pyhscore’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 1 0 Updated Jul 25, 2025

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