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Description
Would it be possible for you to create a bioconda package from this tool?
I think you mainly need to fill a meta.yaml file and also publish a source tar.gz to pip.
The meta needs to look something like:
{% set version = "5.2.0" %}
package:
name: vatools
version: {{ version }}
source:
url: https://pypi.io/packages/source/v/vatools/vatools-{{ version }}.tar.gz
sha256: <sha of tar.gz>
build:
number: 0
entry_points:
- vatools = vatools.cli:main
noarch: python
script: {{ PYTHON }} -m pip install . --no-deps --no-build-isolation -vvv
run_exports:
- {{ pin_subpackage('vatools', max_pin="x") }}
requirements:
host:
- pip
- setuptools
- wheel
- python >=3.8
- hatchling
run:
- vcfpy==0.12.3
- pysam
- pandas
- gtfparse==1.3.0
- testfixtures
test:
imports:
- vatools
commands:
- vatools --help
- vatools --version
about:
home: https://github.com/griffithlab/VAtools
license: MIT
license_family: MIT
license_file: LICENSE
summary: A set of tools to annotate VCF files with expression and readcount data.
extra:
recipe-maintainers:
- Metadata
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